SPEECH AND LANGUAGE THERAPY (MASTER) (WITH THESIS) | |||||
Master | TR-NQF-HE: Level 7 | QF-EHEA: Second Cycle | EQF-LLL: Level 7 |
Course Code: | 3000002009 | ||||||||
Ders İsmi: | Bioinformatic | ||||||||
Ders Yarıyılı: |
Fall |
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Ders Kredileri: |
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Language of instruction: | |||||||||
Ders Koşulu: | |||||||||
Ders İş Deneyimini Gerektiriyor mu?: | No | ||||||||
Type of course: | Anabilim Dalı/Lisansüstü Seçmeli | ||||||||
Course Level: |
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Mode of Delivery: | Face to face | ||||||||
Course Coordinator : | Dr.Öğr.Üyesi Banu TAKTAK KARACA | ||||||||
Course Lecturer(s): | |||||||||
Course Assistants: |
Course Objectives: | Learn about bioinformatics which is a multidisciplinary field at the cross section of molecular biology and computer science. Become knowledgeable about the storage, retrieval, sharing and use of biological data, information, and various tools. Gain familiarity with algorithms used in bioinformatics. |
Course Content: | Overview of bioinformatics, Access to Sequence Data and Literature Information, Pairwise Sequence Alignment, Basic Global and Local Alignment Search Tool (BLAST), Advanced BLAST Searching, Multiple Sequence Alignment, PSI-BLAST and Hidden Markov Model (HMM), Phylogeny. |
The students who have succeeded in this course;
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Week | Subject | Related Preparation |
1) | Introduction to computational biology | Textbook |
2) | Protein sequence analysis | Textbook |
3) | Nucleic acid sequence analysis | Textbook |
4) | Phylogenetic analysis | Textbook |
5) | Binding motifs, Hidden Markov models, 3D structure estimations and modeling | Textbook |
6) | An overvıew of emerging fields; expression analysis, digital image processing, modeling of the cellular signalling pathways | Textbook |
7) | Biomedical information technology; design of the modern information systems related with the biological and medical data | Textbook |
8) | Ara sınav / Midterm | |
9) | Data exchange protocols and computer modeling architecture | Textbook |
10) | Computational neutobiology;; introduction to the nerve system, physiology of the nerve and muscle cells, delivery of signal through synapses and the perception at muscle cells | Textbook |
11) | Advanced biological modeling: The arrangement and analysis of real mathematic models describing biological and engineering processes | Textbook |
12) | Computer algebra systems | |
13) | Methods of disorder, introduction to the optimization | |
14) | Presentation of projects | |
15) | Final Exam |
Course Notes / Textbooks: | Bioinformatics: Sequence and Genome Analysis, by D.Mount, 2004 Structural Bioinformatics, Bourne PE and Weissig H, John Wiley & Sons, 2003 Bioinformatics: Sequence Alignment and Markov Models, by K.R.Sharma, McGraw Hill 2009. Computational Text Analysis for Functional Genomics and Bioinformatics, RayChaudhuri S, Oxford U Press, 2006 |
References: | Bioinformatics: Sequence and Genome Analysis, by D.Mount, 2004 Structural Bioinformatics, Bourne PE and Weissig H, John Wiley & Sons, 2003 Bioinformatics: Sequence Alignment and Markov Models, by K.R.Sharma, McGraw Hill 2009. Computational Text Analysis for Functional Genomics and Bioinformatics, RayChaudhuri S, Oxford U Press, 2006 |
Ders Öğrenme Kazanımları | 1 |
2 |
3 |
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Program Outcomes | |||||||||
1) Defines, recognizes and uses the necessary equipment to evaluate language, speech, voice and swallowing disorders. Makes the necessary applications for language and speech disorders. | |||||||||
2) Makes the necessary evaluations, definitions and planning by using theoretical and applied concepts and principles related to the field of speech and language therapy. | |||||||||
3) It considers and respects individual differences, beliefs, customs and traditions. | |||||||||
4) Applies the knowledge and skills learned in the field of speech and language therapy within the framework of ethical principles, changes the practice when necessary and ends the process. | |||||||||
5) It contributes to the production of health policies in accordance with the changing and diversifying health needs of the society in the field of language and speech therapy, and takes initiatives to protect public health. | |||||||||
6) It organizes services in the field of speech and language therapy effectively and adequately, manages and analyzes the business processes necessary for the continuity and development of quality and organizational function, and produces solutions in line with information and evidence against problems. | |||||||||
7) It carries out professional and academic studies independently by using its knowledge and works in cooperation with other professional groups working in this field and takes responsibility. | |||||||||
8) Participates in research and project applications in the field of speech and language therapy by following technological developments. | |||||||||
9) It determines the differences and needs of individuals in daily life, the ways of meeting these needs and their daily activities and determines the practices that will increase the quality of life in this direction and takes part in the regulations. | |||||||||
10) It fulfills all the responsibilities required by its professional performance, combines and integrates its knowledge and practices in the field of language and speech therapy and adopts lifelong learning. |
No Effect | 1 Lowest | 2 Low | 3 Average | 4 High | 5 Highest |
Program Outcomes | Level of Contribution | |
1) | Defines, recognizes and uses the necessary equipment to evaluate language, speech, voice and swallowing disorders. Makes the necessary applications for language and speech disorders. | |
2) | Makes the necessary evaluations, definitions and planning by using theoretical and applied concepts and principles related to the field of speech and language therapy. | |
3) | It considers and respects individual differences, beliefs, customs and traditions. | |
4) | Applies the knowledge and skills learned in the field of speech and language therapy within the framework of ethical principles, changes the practice when necessary and ends the process. | |
5) | It contributes to the production of health policies in accordance with the changing and diversifying health needs of the society in the field of language and speech therapy, and takes initiatives to protect public health. | |
6) | It organizes services in the field of speech and language therapy effectively and adequately, manages and analyzes the business processes necessary for the continuity and development of quality and organizational function, and produces solutions in line with information and evidence against problems. | |
7) | It carries out professional and academic studies independently by using its knowledge and works in cooperation with other professional groups working in this field and takes responsibility. | |
8) | Participates in research and project applications in the field of speech and language therapy by following technological developments. | |
9) | It determines the differences and needs of individuals in daily life, the ways of meeting these needs and their daily activities and determines the practices that will increase the quality of life in this direction and takes part in the regulations. | |
10) | It fulfills all the responsibilities required by its professional performance, combines and integrates its knowledge and practices in the field of language and speech therapy and adopts lifelong learning. |
Anlatım | |
Course | |
Homework | |
Seminar |
Yazılı Sınav (Açık uçlu sorular, çoktan seçmeli, doğru yanlış, eşleştirme, boşluk doldurma, sıralama) | |
Homework | |
Uygulama | |
Sunum |
Semester Requirements | Number of Activities | Level of Contribution |
Homework Assignments | 7 | % 10 |
Midterms | 1 | % 30 |
Semester Final Exam | 1 | % 60 |
total | % 100 | |
PERCENTAGE OF SEMESTER WORK | % 40 | |
PERCENTAGE OF FINAL WORK | % 60 | |
total | % 100 |
Activities | Number of Activities | Duration (Hours) | Workload |
Course Hours | 15 | 3 | 45 |
Study Hours Out of Class | 15 | 5 | 75 |
Homework Assignments | 10 | 4 | 40 |
Midterms | 1 | 3 | 3 |
Final | 1 | 3 | 3 |
Total Workload | 166 |